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WormBase Tree Display for CDS: PPA07000

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Name Class

PPA07000SMapS_parentSequencePPA_ChrI
StructureSource_exons157
102326
462578
838905
12871382
15061609
17041739
18171944
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-26.29
DB_remarkcontains similarity to Pfam domain PF00335 (Tetraspanin family); contains similarity to Interpro domains IPR018499 (Tetraspanin/Peripherin), IPR008952 (Tetraspanin, EC2 domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00096554
Corresponding_transcriptPPA07000.1
Corresponding_proteinPP59912
Corresponding_oligo_setGPL14372_Probes_54354
GPL14372_Probes_9119
GPL14372_Probes_9120
GPL14372_Probes_9121
Microarray_resultsGPL14372_Probes_9119
GPL14372_Probes_9120
GPL14372_Probes_9121
GPL14372_Probes_54354
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010112.142From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S139-26.29Curator_confirmedWBPerson4055
Methodcurated