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WormBase Tree Display for CDS: PPA07006

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Name Class

PPA07006SMapS_parentSequencePPA_ChrI
StructureSource_exons (33)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-6.46
TREEFAMTREEFAM_IDTF352044
DB_remarkcontains similarity to Pfam domains PF00067 (Cytochrome P450), PF05978 (Ion channel regulatory protein UNC-93); contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR036259 (MFS transporter superfamily), IPR010291 (Ion channel regulatory protein, UNC-93), IPR036396 (Cytochrome P450 superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00096560
Corresponding_transcriptPPA07006.1
Corresponding_proteinPP66369
Corresponding_oligo_setGPL14372_Probes_17925
GPL14372_Probes_17926
GPL14372_Probes_17927
GPL14372_Probes_17928
GPL14372_Probes_68805
GPL14372_Probes_68806
GPL14372_Probes_68808
GPL14372_Probes_68809
Matching_cDNABI500127Inferred_automaticallytranscript_builder.pl
BQ088203Inferred_automaticallytranscript_builder.pl
BQ088188Inferred_automaticallytranscript_builder.pl
BI500330Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_17925
GPL14372_Probes_17926
GPL14372_Probes_17927
GPL14372_Probes_17928
GPL14372_Probes_68805
GPL14372_Probes_68806
GPL14372_Probes_68808
GPL14372_Probes_68809
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.88796From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-6.46Curator_confirmedWBPerson4055
Methodcurated