WormBase Tree Display for CDS: PPA07024

PPA07024 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (12)
  DB_info: Database: pristionchus.org cds gene-UMM-S139-27.34
      TREEFAM TREEFAM_ID TF351735
    DB_remark: PPA-SOX-2 protein; contains similarity to Pfam domain PF00505 (HMG (high mobility group) box); contains similarity to Interpro domains IPR036910 (High mobility group box domain superfamily), IPR009071 (High mobility group box domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00096578
    Corresponding_transcript: PPA07024.1
    Corresponding_protein: PP54229
    Corresponding_oligo_set: GPL14372_Probes_9087
      GPL14372_Probes_9088
      GPL14372_Probes_9089
      GPL14372_Probes_9090
      GPL14372_Probes_9091
    Microarray_results: GPL14372_Probes_9087
      GPL14372_Probes_9088
      GPL14372_Probes_9089
      GPL14372_Probes_9090
      GPL14372_Probes_9091
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S139-27.34 Curator_confirmed: WBPerson4055
  Method: curated