WormBase Tree Display for CDS: PPA07033
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PPA07033 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 44 | |||
401 | 464 | |||||
790 | 859 | |||||
1097 | 1166 | |||||
1468 | 1531 | |||||
1591 | 1638 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S139-28.31 | ||
DB_remark | PPA-DYLT-2 protein; contains similarity to Pfam domain PF03645 (Tctex-1 family); contains similarity to Interpro domains IPR005334 (Dynein light chain Tctex-1 like), IPR038586 (Tctex-1-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00096587 | ||||
Corresponding_transcript | PPA07033.1 | |||||
Corresponding_protein | PP34655 | |||||
Corresponding_oligo_set | GPL14372_Probes_54274 | |||||
GPL14372_Probes_54275 | ||||||
GPL14372_Probes_54276 | ||||||
Microarray_results | GPL14372_Probes_54274 | |||||
GPL14372_Probes_54275 | ||||||
GPL14372_Probes_54276 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S139-28.31 | Curator_confirmed | WBPerson4055 | |||
Method | curated |