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WormBase Tree Display for CDS: PPA07042

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Name Class

PPA07042SMapS_parentSequencePPA_ChrI
StructureSource_exons (62)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S139-28.112
DB_remarkcontains similarity to Pfam domains PF03215 (Rad17 P-loop domain), PF06814 (Lung seven transmembrane receptor); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR009637 (Transmembrane protein GPR107/GPR108-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00096596
Corresponding_transcriptPPA07042.1
Corresponding_proteinPP60388
Corresponding_oligo_setGPL14372_Probes_54254
GPL14372_Probes_54255
GPL14372_Probes_54256
Microarray_resultsGPL14372_Probes_54254
GPL14372_Probes_54255
GPL14372_Probes_54256
RNASeq_FPKMWBls:00000320.654662From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.5462From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S139-28.112Curator_confirmedWBPerson4055
Methodcurated