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WormBase Tree Display for CDS: PPA07067

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Name Class

PPA07067SMapS_parentSequencePPA_ChrI
StructureSource_exons (17)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-0.3
DB_remarkcontains similarity to Pfam domains PF00018 (SH3 domain), PF00790 (VHS domain); contains similarity to Interpro domains IPR002014 (VHS domain), IPR036028 (SH3-like domain superfamily), IPR001452 (SH3 domain), IPR008942 (ENTH/VHS)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00096621
Corresponding_transcriptPPA07067.1
Corresponding_proteinPP71721
Corresponding_oligo_setGPL14372_Probes_5472
GPL14372_Probes_5473
GPL14372_Probes_5474
GPL14372_Probes_5475
GPL14372_Probes_5476
Microarray_resultsGPL14372_Probes_5472
GPL14372_Probes_5473
GPL14372_Probes_5474
GPL14372_Probes_5475
GPL14372_Probes_5476
RNASeq_FPKMWBls:00000322.25473From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.66292From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S139-0.3Curator_confirmedWBPerson4055
Methodcurated