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WormBase Tree Display for CDS: PPA07112

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Name Class

PPA07112SMapS_parentSequencePPA_ChrI
StructureSource_exons170
303443
11151277
13541369
20422161
22792803
41884343
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-97.53
DB_remarkcontains similarity to Pfam domain PF00076 (RNA recognition motif); contains similarity to Interpro domains IPR035979 (RNA-binding domain superfamily), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily), IPR000504 (RNA recognition motif domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00096666
Corresponding_transcriptPPA07112.1
Corresponding_proteinPP61708
Corresponding_oligo_setGPL14372_Probes_8957
GPL14372_Probes_8958
GPL14372_Probes_8959
GPL14372_Probes_8960
Microarray_resultsGPL14372_Probes_8957
GPL14372_Probes_8958
GPL14372_Probes_8959
GPL14372_Probes_8960
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S7-97.53Curator_confirmedWBPerson4055
Methodcurated