WormBase Tree Display for CDS: PPA07118

PPA07118 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 38
      172 250
      309 413
      501 527
      1310 1425
      1566 1683
      1760 1839
      1922 2321
  DB_info: Database: pristionchus.org cds gene-UMM-S7-96.62
    DB_remark: contains similarity to Pfam domains PF00076 (RNA recognition motif), PF00097 (Zinc finger, C3HC4 type (RING finger)); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR035979 (RNA-binding domain superfamily), IPR018957 (Zinc finger, C3HC4 RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily), IPR000504 (RNA recognition motif domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00096672
    Corresponding_transcript: PPA07118.1
    Corresponding_protein: PP53582
    Corresponding_oligo_set: GPL14372_Probes_8948
      GPL14372_Probes_8949
      GPL14372_Probes_8950
      GPL14372_Probes_8951
    Microarray_results: GPL14372_Probes_8948
      GPL14372_Probes_8949
      GPL14372_Probes_8950
      GPL14372_Probes_8951
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S7-96.62 Curator_confirmed: WBPerson4055
  Method: curated