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WormBase Tree Display for CDS: PPA07654

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Name Class

PPA07654SMapS_parentSequencePPA_ChrII
StructureSource_exons (23)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-32.58
TREEFAMTREEFAM_IDTF317380
DB_remarkcontains similarity to Pfam domains PF01545 (Cation efflux family), PF16916 (Dimerisation domain of Zinc Transporter); contains similarity to Interpro domains IPR002524 (Cation efflux protein), IPR027470 (Cation efflux protein, cytoplasmic domain), IPR036837 (Cation efflux protein, cytoplasmic domain superfamily), IPR027469 (Cation efflux transmembrane domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
Start_not_found1
VisibleGeneWBGene00097208
Corresponding_transcriptPPA07654.1
Corresponding_proteinPP64799
Corresponding_oligo_setGPL14372_Probes_69057
Microarray_resultsGPL14372_Probes_69057
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.99586From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-32.58Curator_confirmedWBPerson4055
Methodcurated