WormBase Tree Display for CDS: PPA07921
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PPA07921 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 131 | |||
180 | 234 | |||||
288 | 428 | |||||
471 | 512 | |||||
583 | 729 | |||||
1000 | 1110 | |||||
1194 | 1265 | |||||
1415 | 1549 | |||||
1727 | 1858 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-16.41 | ||
DB_remark | contains similarity to Pfam domain PF02118 (Srg family chemoreceptor); contains similarity to Interpro domain IPR000609 (7TM GPCR, serpentine receptor class g (Srg)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00097475 | ||||
Corresponding_transcript | PPA07921.1 | |||||
Corresponding_protein | PP63455 | |||||
Corresponding_oligo_set | GPL14372_Probes_29834 | |||||
GPL14372_Probes_29835 | ||||||
GPL14372_Probes_29837 | ||||||
Microarray_results | GPL14372_Probes_29834 | |||||
GPL14372_Probes_29835 | ||||||
GPL14372_Probes_29837 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S41-16.41 | Curator_confirmed | WBPerson4055 | |||
Method | curated |