WormBase Tree Display for CDS: PPA07936
expand all nodes | collapse all nodes | view schema
PPA07936 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (28) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-18.31 | ||
TREEFAM | TREEFAM_ID | TF316196 | ||||
DB_remark | PPA-ZNF-598 protein; contains similarity to Pfam domain PF13920 (Zinc finger, C3HC4 type (RING finger)); contains similarity to Interpro domains IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR013087 (Zinc finger C2H2-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00097490 | ||||
Corresponding_transcript | PPA07936.1 | |||||
Corresponding_protein | PP72004 | |||||
Corresponding_oligo_set | GPL14372_Probes_86049 | |||||
GPL14372_Probes_86052 | ||||||
Microarray_results | GPL14372_Probes_86049 | |||||
GPL14372_Probes_86052 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S41-18.31 | Curator_confirmed | WBPerson4055 | |||
Method | curated |