WormBase Tree Display for CDS: PPA08175
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PPA08175 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S394-3.29 | ||
DB_remark | contains similarity to Pfam domain PF05640 (Na,K-Atpase Interacting protein); contains similarity to Interpro domain IPR008516 (Na,K-Atpase Interacting protein) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00097729 | ||||
Corresponding_transcript | PPA08175.1 | |||||
Corresponding_protein | PP74241 | |||||
Corresponding_oligo_set | GPL14372_Probes_90383 | |||||
GPL14372_Probes_90384 | ||||||
GPL14372_Probes_90385 | ||||||
GPL14372_Probes_90386 | ||||||
GPL14372_Probes_90387 | ||||||
Matching_cDNA | AW097461 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_90383 | |||||
GPL14372_Probes_90384 | ||||||
GPL14372_Probes_90385 | ||||||
GPL14372_Probes_90386 | ||||||
GPL14372_Probes_90387 | ||||||
RNASeq_FPKM | WBls:0000032 | 15.8384 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 13.3612 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S394-3.29 | Curator_confirmed | WBPerson4055 | |||
Method | curated |