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WormBase Tree Display for CDS: PPA08207

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Name Class

PPA08207SMapS_parentSequencePPA_ChrII
StructureSource_exons178
152196
270355
408489
9491047
10961137
DB_infoDatabasepristionchus.orgcdsgene-UMS-S394-1.12
TREEFAMTREEFAM_IDTF331873
DB_remarkcontains similarity to Pfam domain PF13905 (Thioredoxin-like); contains similarity to Interpro domains IPR012336 (Thioredoxin-like fold), IPR036249 (Thioredoxin-like superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00097761
Corresponding_transcriptPPA08207.1
Corresponding_proteinPP68627
Corresponding_oligo_setGPL14372_Probes_90541
GPL14372_Probes_90543
GPL14372_Probes_90544
Matching_cDNACO871228Inferred_automaticallytranscript_builder.pl
CN656875Inferred_automaticallytranscript_builder.pl
BM812348Inferred_automaticallytranscript_builder.pl
FG095393Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_90541
GPL14372_Probes_90543
GPL14372_Probes_90544
RNASeq_FPKMWBls:0000032406.392From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101460.554From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S394-1.12Curator_confirmedWBPerson4055
Methodcurated