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WormBase Tree Display for CDS: PPA08250

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Name Class

PPA08250SMapS_parentSequencePPA_ChrII
StructureSource_exons (16)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S394-0.0
DB_remarkPPA-EGL-27 protein; contains similarity to Pfam domains PF00320 (GATA zinc finger), PF01448 (ELM2 domain); contains similarity to Interpro domains IPR000679 (Zinc finger, GATA-type), IPR000949 (ELM2 domain), IPR001005 (SANT/Myb domain), IPR009057 (Homeobox-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
Start_not_found1
End_not_found
VisibleGeneWBGene00097804
Corresponding_transcriptPPA08250.1
Corresponding_proteinPP58379
Corresponding_oligo_setGPL14372_Probes_90682
GPL14372_Probes_90683
GPL14372_Probes_90684
GPL14372_Probes_90685
GPL14372_Probes_90686
GPL14372_Probes_90687
GPL14372_Probes_90688
Matching_cDNAEB184012Inferred_automaticallytranscript_builder.pl
FE938092Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_90682
GPL14372_Probes_90683
GPL14372_Probes_90684
GPL14372_Probes_90685
GPL14372_Probes_90686
GPL14372_Probes_90687
GPL14372_Probes_90688
RNASeq_FPKMWBls:000003261.431From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010124.183From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S394-0.0Curator_confirmedWBPerson4055
Methodcurated