WormBase Tree Display for CDS: PPA08413
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PPA08413 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 40 | |||
210 | 301 | |||||
484 | 526 | |||||
1395 | 1458 | |||||
1524 | 1626 | |||||
1891 | 2000 | |||||
2827 | 2885 | |||||
5010 | 5098 | |||||
5341 | 5463 | |||||
6843 | 6971 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S139-11.27 | ||
DB_remark | contains similarity to Pfam domain PF10316 (Serpentine type 7TM GPCR chemoreceptor Srbc); contains similarity to Interpro domain IPR019420 (7TM GPCR, serpentine receptor class bc (Srbc)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00097967 | ||||
Corresponding_transcript | PPA08413.1 | |||||
Corresponding_protein | PP57491 | |||||
Corresponding_oligo_set | GPL14372_Probes_31072 | |||||
GPL14372_Probes_31074 | ||||||
GPL14372_Probes_31075 | ||||||
Microarray_results | GPL14372_Probes_31072 | |||||
GPL14372_Probes_31074 | ||||||
GPL14372_Probes_31075 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S139-11.27 | Curator_confirmed | WBPerson4055 | |||
Method | curated |