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WormBase Tree Display for CDS: PPA08436

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Name Class

PPA08436SMapS_parentSequencePPA_ChrI
StructureSource_exons (14)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-10.7
TREEFAMTREEFAM_IDTF324895
DB_remarkPPA-MPDU-1 protein; contains similarity to Pfam domains PF04193 (PQ loop repeat), PF10171 (Translocase of the Inner Mitochondrial membrane 29); contains similarity to Interpro domains IPR019322 (Mitochondrial import inner membrane translocase subunit Tim29), IPR006603 (PQ-loop repeat), IPR016817 (Mannose-P-dolichol utilization defect 1 protein)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00097990
Corresponding_transcriptPPA08436.1
Corresponding_proteinPP63652
Corresponding_oligo_setGPL14372_Probes_88088
GPL14372_Probes_88090
GPL14372_Probes_88091
GPL14372_Probes_88092
Matching_cDNAFG104813Inferred_automaticallytranscript_builder.pl
FG098801Inferred_automaticallytranscript_builder.pl
FE935157Inferred_automaticallytranscript_builder.pl
FG103111Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_88088
GPL14372_Probes_88090
GPL14372_Probes_88091
GPL14372_Probes_88092
RNASeq_FPKMWBls:000003217.4658From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010117.6812From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S139-10.7Curator_confirmedWBPerson4055
Methodcurated