WormBase Tree Display for CDS: PPA08458

PPA08458 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (35)
  DB_info: Database: pristionchus.org cds gene-UMM-S139-8.48
    DB_remark: contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000719 (Protein kinase domain), IPR004122 (Barrier- to-autointegration factor, BAF)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00098012
    Corresponding_transcript: PPA08458.1
    Corresponding_protein: PP54646
    Corresponding_oligo_set: GPL14372_Probes_88121
      GPL14372_Probes_88122
      GPL14372_Probes_88123
      GPL14372_Probes_88124
      GPL14372_Probes_88125
      GPL14372_Probes_88126
    Matching_cDNA: EB183734 Inferred_automatically: transcript_builder.pl
      AW114805 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_88121
      GPL14372_Probes_88122
      GPL14372_Probes_88123
      GPL14372_Probes_88124
      GPL14372_Probes_88125
      GPL14372_Probes_88126
    RNASeq_FPKM: WBls:0000032 1.2269 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 11.5913 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S139-8.48 Curator_confirmed: WBPerson4055
  Method: curated