WormBase Tree Display for CDS: PPA08667

PPA08667 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (20)
  DB_info: Database: pristionchus.org cds gene-UMM-S7-87.6
    DB_remark: PPA-SCC-1 protein; contains similarity to Pfam domains PF04824 (Conserved region of Rad21 / Rec8 like protein), PF04825 (N terminus of Rad21 / Rec8 like protein); contains similarity to Interpro domains IPR006909 (Rad21/Rec8-like protein, C-terminal, eukaryotic), IPR023093 (ScpA-like, C-terminal), IPR036390 (Winged helix DNA-binding domain superfamily), IPR006910 (Rad21/Rec8-like protein, N-terminal), IPR039781 (Rad21/Rec8-like protein)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00098221
    Corresponding_transcript: PPA08667.1
    Corresponding_protein: PP56868
    Corresponding_oligo_set: GPL14372_Probes_21765
      GPL14372_Probes_21766
      GPL14372_Probes_21767
      GPL14372_Probes_21768
      GPL14372_Probes_46154
    Microarray_results: GPL14372_Probes_21765
      GPL14372_Probes_21766
      GPL14372_Probes_21767
      GPL14372_Probes_21768
      GPL14372_Probes_46154
    RNASeq_FPKM: WBls:0000032 2.01805 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 7.15005 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S7-87.6 Curator_confirmed: WBPerson4055
  Method: curated