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WormBase Tree Display for CDS: PPA08744

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Name Class

PPA08744SMapS_parentSequencePPA_ChrI
StructureSource_exons (20)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S7-91.17
DB_remarkPPA-BCA-1 protein; contains similarity to Pfam domains PF00071 (Ras family), PF00484 (Carbonic anhydrase); contains similarity to Interpro domains IPR001806 (Small GTPase), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR036874 (Carbonic anhydrase superfamily), IPR001765 (Carbonic anhydrase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00098298
Corresponding_transcriptPPA08744.1
Corresponding_proteinPP73790
Corresponding_oligo_setGPL14372_Probes_74326
GPL14372_Probes_74328
GPL14372_Probes_74329
Matching_cDNAFG100705Inferred_automaticallytranscript_builder.pl
FG098717Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_74326
GPL14372_Probes_74328
GPL14372_Probes_74329
RNASeq_FPKMWBls:000003210.8861From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S7-91.17Curator_confirmedWBPerson4055
Methodcurated