WormBase Tree Display for CDS: PPA08998b
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PPA08998b | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrIV | |||
Structure | Source_exons | 1 | 90 | |||
178 | 296 | |||||
344 | 409 | |||||
456 | 558 | |||||
1141 | 1215 | |||||
DB_info | DB_remark | PPA-IMMP-2 protein; contains similarity to Interpro domains IPR036286 (LexA/Signal peptidase-like superfamily), IPR037730 (Mitochondrial inner membrane protease subunit 2), IPR000223 (Peptidase S26A, signal peptidase I) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Predicted | |||||
Isoform | Curator_confirmed | WBPerson4055 | ||||
Visible | Gene | WBGene00098552 | ||||
Corresponding_transcript | PPA08998b.1 | |||||
Corresponding_protein | PP76022 | |||||
Corresponding_oligo_set | GPL14372_Probes_38238 | |||||
Microarray_results | GPL14372_Probes_38238 | |||||
RNASeq_FPKM | WBls:0000032 | 19.5609 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 121.942 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 05 Dec 2019 10:40:50 | WBPerson4055 | ||||
Remark | [191205 mh6] This structure has been created based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |