WormBase Tree Display for CDS: PPA09030
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PPA09030 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons (230) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2840-74.82 | ||
DB_remark | contains similarity to Pfam domains PF00450 (Serine carboxypeptidase), PF07914 (Uncharacterized oxidoreductase dhs-27); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR029058 (Alpha/Beta hydrolase fold), IPR015897 (CHK kinase-like), IPR001563 (Peptidase S10, serine carboxypeptidase), IPR012877 (Uncharacterised oxidoreductase Dhs-27) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00098584 | ||||
Corresponding_transcript | PPA09030.1 | |||||
Corresponding_protein | PP69852 | |||||
Corresponding_oligo_set (13) | ||||||
Microarray_results (13) | ||||||
RNASeq_FPKM | WBls:0000032 | 0.477878 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 1.50483 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2840-74.82 | Curator_confirmed | WBPerson4055 | |||
Method | curated |