WormBase Tree Display for CDS: PPA09101
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PPA09101 | SMap | S_parent | Sequence | PPA_ChrIII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 57 | |||
728 | 822 | |||||
2768 | 2861 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S112-18.11 | ||
DB_remark | contains similarity to Pfam domain PF01722 (BolA-like protein); contains similarity to Interpro domains IPR002634 (BolA protein), IPR036065 (BolA-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00098655 | ||||
Corresponding_transcript | PPA09101.1 | |||||
Corresponding_protein | PP68012 | |||||
Matching_cDNA | FG102839 | Inferred_automatically | transcript_builder.pl | |||
RNASeq_FPKM | WBls:0000032 | 31.7092 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 121.756 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S112-18.11 | Curator_confirmed | WBPerson4055 | |||
Method | curated |