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WormBase Tree Display for CDS: PPA09130

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Name Class

PPA09130SMapS_parentSequencePPA_ChrII
StructureSource_exons (48)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-84.72
TREEFAMTREEFAM_IDTF313804
DB_remarkcontains similarity to Pfam domains PF12894 (Anaphase-promoting complex subunit 4 WD40 domain), PF13911 (AhpC/TSA antioxidant enzyme); contains similarity to Interpro domains IPR032801 (Peroxiredoxin-like 2A/B/C), IPR024977 (Anaphase-promoting complex subunit 4-like, WD40 domain), IPR036322 (WD40-repeat-containing domain superfamily), IPR036249 (Thioredoxin-like superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily), IPR016024 (Armadillo-type fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00098684
Corresponding_transcriptPPA09130.1
Corresponding_proteinPP64851
Corresponding_oligo_set (13)
Matching_cDNAAI989119Inferred_automaticallytranscript_builder.pl
Microarray_results (13)
RNASeq_FPKMWBls:00000321.42927From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.2196From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-84.72Curator_confirmedWBPerson4055
Methodcurated