WormBase Tree Display for CDS: PPA09152
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| PPA09152 | SMap | S_parent | Sequence | PPA_ChrII | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (11) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S10-86.23 | ||
| DB_remark | PPA-SRO-1 protein; contains similarity to Pfam domain PF00001 (7 transmembrane receptor (rhodopsin family)); contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like, 7TM), IPR000276 (G protein-coupled receptor, rhodopsin-like) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00098706 | ||||
| Corresponding_transcript | PPA09152.1 | |||||
| Corresponding_protein | PP54654 | |||||
| RNASeq_FPKM | WBls:0000032 | 7.1421 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 4.2179 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMM-S10-86.23 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
