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WormBase Tree Display for CDS: PPA09177

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Name Class

PPA09177SMapS_parentSequencePPA_ChrII
StructureSource_exons (45)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-87.10
DB_remarkPPA-NRDE-2 protein; contains similarity to Pfam domains PF05832 (Eukaryotic protein of unknown function (DUF846)), PF08424 (NRDE-2, necessary for RNA interference); contains similarity to Interpro domains IPR008564 (Golgi apparatus membrane protein TVP23-like), IPR013633 (siRNA-mediated silencing protein NRDE-2)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00098731
Corresponding_transcriptPPA09177.1
Corresponding_proteinPP68192
Corresponding_oligo_setGPL14372_Probes_63708
GPL14372_Probes_63709
GPL14372_Probes_63710
GPL14372_Probes_63711
GPL14372_Probes_63712
GPL14372_Probes_63713
GPL14372_Probes_63714
GPL14372_Probes_63715
Microarray_resultsGPL14372_Probes_63708
GPL14372_Probes_63709
GPL14372_Probes_63710
GPL14372_Probes_63711
GPL14372_Probes_63712
GPL14372_Probes_63713
GPL14372_Probes_63714
GPL14372_Probes_63715
RNASeq_FPKMWBls:00000326.18955From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001016.3957From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-87.10Curator_confirmedWBPerson4055
Methodcurated