WormBase Tree Display for CDS: PPA09382
expand all nodes | collapse all nodes | view schema
PPA09382 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 43 | |||
368 | 445 | |||||
1391 | 1610 | |||||
1660 | 1741 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-43.4 | ||
TREEFAM | TREEFAM_ID | TF315446 | ||||
DB_remark | contains similarity to Pfam domain PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain); contains similarity to Interpro domains IPR036880 (Pancreatic trypsin inhibitor Kunitz domain superfamily), IPR002223 (Pancreatic trypsin inhibitor Kunitz domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00098936 | ||||
Corresponding_transcript | PPA09382.1 | |||||
Corresponding_protein | PP55070 | |||||
Corresponding_oligo_set | GPL14372_Probes_91200 | |||||
GPL14372_Probes_91202 | ||||||
Microarray_results | GPL14372_Probes_91200 | |||||
GPL14372_Probes_91202 | ||||||
RNASeq_FPKM | WBls:0000032 | 14.6521 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 51.9559 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-43.4 | Curator_confirmed | WBPerson4055 | |||
Method | curated |