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WormBase Tree Display for CDS: PPA09426

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Name Class

PPA09426SMapS_parentSequencePPA_ChrI
StructureSource_exons189
264363
28052861
29273039
32443316
35073576
37783860
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2844-41.5
DB_remarkcontains similarity to Pfam domain PF00149 (Calcineurin-like phosphoesterase); contains similarity to Interpro domains IPR029052 (Metallo-dependent phosphatase-like), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase), IPR004843 (Calcineurin-like phosphoesterase domain, ApaH type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00098980
Corresponding_transcriptPPA09426.1
Corresponding_proteinPP69191
Corresponding_oligo_setGPL14372_Probes_91143
GPL14372_Probes_91146
Microarray_resultsGPL14372_Probes_91143
GPL14372_Probes_91146
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2844-41.5Curator_confirmedWBPerson4055
Methodcurated