WormBase Tree Display for CDS: PPA09437
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PPA09437 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 138 | |||
427 | 521 | |||||
783 | 927 | |||||
1861 | 1950 | |||||
2470 | 2583 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-40.31 | ||
DB_remark | contains similarity to Pfam domains PF04810 (Sec23/Sec24 zinc finger), PF04811 (Sec23/Sec24 trunk domain); contains similarity to Interpro domains IPR036465 (von Willebrand factor A-like domain superfamily), IPR006896 (Sec23/Sec24, trunk domain), IPR037364 (Protein transport protein Sec23), IPR036174 (Zinc finger, Sec23/Sec24-type superfamily), IPR006895 (Zinc finger, Sec23/Sec24-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
End_not_found | ||||||
Visible | Gene | WBGene00098991 | ||||
Corresponding_transcript | PPA09437.1 | |||||
Corresponding_protein | PP57755 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-40.31 | Curator_confirmed | WBPerson4055 | |||
Method | curated |