WormBase Tree Display for CDS: PPA09467
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PPA09467 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (44) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S2844-39.0 | ||
DB_remark | contains similarity to Pfam domain PF02874 (ATP synthase alpha/beta family, beta-barrel domain); contains similarity to Interpro domains IPR004100 (ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain), IPR036121 (ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00099021 | ||||
Corresponding_transcript | PPA09467.1 | |||||
Corresponding_protein | PP74205 | |||||
Corresponding_oligo_set | GPL14372_Probes_33339 | |||||
GPL14372_Probes_33340 | ||||||
GPL14372_Probes_33341 | ||||||
GPL14372_Probes_33342 | ||||||
GPL14372_Probes_33343 | ||||||
GPL14372_Probes_91038 | ||||||
Microarray_results | GPL14372_Probes_33339 | |||||
GPL14372_Probes_33340 | ||||||
GPL14372_Probes_33341 | ||||||
GPL14372_Probes_33342 | ||||||
GPL14372_Probes_33343 | ||||||
GPL14372_Probes_91038 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 10.5808 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S2844-39.0 | Curator_confirmed | WBPerson4055 | |||
Method | curated |