WormBase Tree Display for CDS: PPA09505
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PPA09505 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 126 | |||
310 | 438 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-36.21 | ||
TREEFAM | TREEFAM_ID | TF300265 | ||||
DB_remark | PPA-RPS-27.2 protein; contains similarity to Pfam domain PF01667 (Ribosomal protein S27); contains similarity to Interpro domains IPR011332 (Zinc-binding ribosomal protein), IPR000592 (Small ribosomal subunit protein eS27) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00099059 | ||||
Corresponding_transcript | PPA09505.1 | |||||
Corresponding_protein | PP12470 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-36.21 | Curator_confirmed | WBPerson4055 | |||
Method | curated |