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WormBase Tree Display for CDS: PPA09523

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Name Class

PPA09523SMapS_parentSequencePPA_ChrI
StructureSource_exons (21)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S2844-34.65
DB_remarkPPA-ACR-18 protein; contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain), PF02932 (Neurotransmitter-gated ion-channel transmembrane region); contains similarity to Interpro domains IPR036734 (Neurotransmitter-gated ion-channel ligand-binding domain superfamily), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding domain), IPR036719 (Neurotransmitter-gated ion-channel transmembrane domain superfamily), IPR006201 (Neurotransmitter-gated ion-channel), IPR006029 (Neurotransmitter-gated ion-channel transmembrane domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00099077
Corresponding_transcriptPPA09523.1
Corresponding_proteinPP71657
Corresponding_oligo_setGPL14372_Probes_33280
GPL14372_Probes_33282
GPL14372_Probes_33284
Microarray_resultsGPL14372_Probes_33280
GPL14372_Probes_33282
GPL14372_Probes_33284
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S2844-34.65Curator_confirmedWBPerson4055
Methodcurated