WormBase Tree Display for CDS: PPA09546

PPA09546 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (27)
  DB_info: Database: pristionchus.org cds gene-UMM-S2844-33.1
      TREEFAM TREEFAM_ID TF314855
    DB_remark: PPA-CSN-1 protein; contains similarity to Pfam domains PF01399 (PCI domain), PF10602 (26S proteasome subunit RPN7); contains similarity to Interpro domains IPR033008 (), IPR036390 (Winged helix DNA-binding domain superfamily), IPR000717 (Proteasome component (PCI) domain), IPR019585 (26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00099100
    Corresponding_transcript: PPA09546.1
    Corresponding_protein: PP56634
    Corresponding_oligo_set: GPL14372_Probes_33239
      GPL14372_Probes_33240
      GPL14372_Probes_33241
      GPL14372_Probes_33242
      GPL14372_Probes_33243
    Microarray_results: GPL14372_Probes_33239
      GPL14372_Probes_33240
      GPL14372_Probes_33241
      GPL14372_Probes_33242
      GPL14372_Probes_33243
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S2844-33.1 Curator_confirmed: WBPerson4055
  Method: curated