WormBase Tree Display for CDS: PPA09556
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PPA09556 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (32) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-32.48 | ||
DB_remark | contains similarity to Pfam domain PF00171 (Aldehyde dehydrogenase family); contains similarity to Interpro domains IPR016162 (Aldehyde dehydrogenase, N-terminal), IPR016161 (Aldehyde/histidinol dehydrogenase), IPR016163 (Aldehyde dehydrogenase, C-terminal), IPR015590 (Aldehyde dehydrogenase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00099110 | ||||
Corresponding_transcript | PPA09556.1 | |||||
Corresponding_protein | PP66761 | |||||
Corresponding_oligo_set | GPL14372_Probes_90913 | |||||
GPL14372_Probes_90915 | ||||||
GPL14372_Probes_90916 | ||||||
GPL14372_Probes_90917 | ||||||
GPL14372_Probes_90918 | ||||||
Microarray_results | GPL14372_Probes_90913 | |||||
GPL14372_Probes_90915 | ||||||
GPL14372_Probes_90916 | ||||||
GPL14372_Probes_90917 | ||||||
GPL14372_Probes_90918 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 5.61644 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-32.48 | Curator_confirmed | WBPerson4055 | |||
Method | curated |