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WormBase Tree Display for CDS: PPA09580

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Name Class

PPA09580SMapS_parentSequencePPA_ChrX
StructureSource_exons1716
760891
9561153
12001391
14681593
17641956
21742290
DB_infoDatabasepristionchus.orgcdsgene-UMM-S328-10.94
DB_remarkcontains similarity to Pfam domain PF13920 (Zinc finger, C3HC4 type (RING finger)); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00099134
Corresponding_transcriptPPA09580.1
Corresponding_proteinPP73990
Corresponding_oligo_setGPL14372_Probes_16108
GPL14372_Probes_16109
GPL14372_Probes_16110
GPL14372_Probes_16111
GPL14372_Probes_16113
Microarray_resultsGPL14372_Probes_16108
GPL14372_Probes_16109
GPL14372_Probes_16110
GPL14372_Probes_16111
GPL14372_Probes_16113
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S328-10.94Curator_confirmedWBPerson4055
Methodcurated