WormBase Tree Display for CDS: PPA09586

PPA09586 Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: PPA_ChrX
  Structure: Source_exons: 1 67
      160 249
      719 811
      1577 1700
      2599 2722
      3438 3548
  DB_info: Database: pristionchus.org cds gene-UMM-S328-10.98
    DB_remark: PPA-HSP-25 protein; contains similarity to Pfam domain PF00011 (Hsp20/alpha crystallin family); contains similarity to Interpro domains IPR002068 (Alpha crystallin/Hsp20 domain), IPR008978 (HSP20-like chaperone), IPR001436 (Alpha crystallin/Small heat shock protein, animal type)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00099140
    Corresponding_transcript: PPA09586.1
    Corresponding_protein: PP59029
    Corresponding_oligo_set: GPL14372_Probes_65101
      GPL14372_Probes_65102
    Matching_cDNA: BM320265 Inferred_automatically: transcript_builder.pl
      EB184380 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_65101
      GPL14372_Probes_65102
    RNASeq_FPKM: WBls:0000032 29.3071 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 44.5077 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S328-10.98 Curator_confirmed: WBPerson4055
  Method: curated