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WormBase Tree Display for CDS: PPA09873

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Name Class

PPA09873SMapS_parentSequencePPA_ChrI
StructureSource_exons (38)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S259-10.63
DB_remarkcontains similarity to Pfam domains PF00089 (Trypsin), PF03761 (Nematode trypsin-6-like family), PF05978 (Ion channel regulatory protein UNC-93); contains similarity to Interpro domains IPR043504 (Peptidase S1, PA clan, chymotrypsin-like fold), IPR005514 (Chymotrypsin family Peptidase-S1), IPR036259 (MFS transporter superfamily), IPR010291 (Ion channel regulatory protein, UNC-93), IPR001254 (Serine proteases, trypsin domain), IPR009003 (Peptidase S1, PA clan)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00099427
Corresponding_transcriptPPA09873.1
Corresponding_proteinPP58635
Corresponding_oligo_setGPL14372_Probes_15506
GPL14372_Probes_15507
Microarray_resultsGPL14372_Probes_15506
GPL14372_Probes_15507
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S259-10.63Curator_confirmedWBPerson4055
Methodcurated