WormBase Tree Display for CDS: PPA10053
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PPA10053 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 132 | |||
401 | 521 | |||||
1266 | 1342 | |||||
1596 | 1649 | |||||
1890 | 1981 | |||||
2133 | 2246 | |||||
3102 | 3169 | |||||
3307 | 3376 | |||||
4058 | 4190 | |||||
4383 | 4547 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S296-7.72 | ||
TREEFAM | TREEFAM_ID | TF313251 | ||||
DB_remark | PPA-FAT-5 protein; contains similarity to Interpro domain IPR015876 (Acyl-CoA desaturase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00099607 | ||||
Corresponding_transcript | PPA10053.1 | |||||
Corresponding_protein | PP62327 | |||||
Corresponding_oligo_set | GPL14372_Probes_34984 | |||||
GPL14372_Probes_34985 | ||||||
GPL14372_Probes_82520 | ||||||
GPL14372_Probes_82521 | ||||||
Microarray_results | GPL14372_Probes_34984 | |||||
GPL14372_Probes_34985 | ||||||
GPL14372_Probes_82520 | ||||||
GPL14372_Probes_82521 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S296-7.72 | Curator_confirmed | WBPerson4055 | |||
Method | curated |