WormBase Tree Display for CDS: PPA10165
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PPA10165 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (28) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-36.49 | ||
TREEFAM | TREEFAM_ID | TF342827 | ||||
DB_remark | contains similarity to Pfam domains PF00067 (Cytochrome P450), PF13622 (Acyl-CoA thioesterase N-terminal domain); contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR036396 (Cytochrome P450 superfamily), IPR029069 (HotDog domain superfamily), IPR042171 (Acyl-CoA thioesterase, double hotdog domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00099719 | ||||
Corresponding_transcript | PPA10165.1 | |||||
Corresponding_protein | PP55395 | |||||
Corresponding_oligo_set | GPL14372_Probes_35391 | |||||
GPL14372_Probes_35392 | ||||||
GPL14372_Probes_36111 | ||||||
GPL14372_Probes_36112 | ||||||
GPL14372_Probes_36113 | ||||||
GPL14372_Probes_36114 | ||||||
GPL14372_Probes_36115 | ||||||
GPL14372_Probes_36116 | ||||||
GPL14372_Probes_36117 | ||||||
Microarray_results | GPL14372_Probes_35391 | |||||
GPL14372_Probes_35392 | ||||||
GPL14372_Probes_36111 | ||||||
GPL14372_Probes_36112 | ||||||
GPL14372_Probes_36113 | ||||||
GPL14372_Probes_36114 | ||||||
GPL14372_Probes_36115 | ||||||
GPL14372_Probes_36116 | ||||||
GPL14372_Probes_36117 | ||||||
RNASeq_FPKM | WBls:0000032 | 3.00102 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 10.6324 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-36.49 | Curator_confirmed | WBPerson4055 | |||
Method | curated |