WormBase Tree Display for CDS: PPA10170
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PPA10170 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-4.3 | ||
DB_remark | PPA-DMSR-3 protein; contains similarity to Pfam domain PF10324 (Serpentine type 7TM GPCR chemoreceptor Srw); contains similarity to Interpro domains IPR019427 (7TM GPCR, serpentine receptor class w (Srw)), IPR000276 (G protein-coupled receptor, rhodopsin-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00099724 | ||||
Corresponding_transcript | PPA10170.1 | |||||
Corresponding_protein | PP55628 | |||||
Corresponding_oligo_set | GPL14372_Probes_27433 | |||||
GPL14372_Probes_82380 | ||||||
GPL14372_Probes_82381 | ||||||
GPL14372_Probes_82382 | ||||||
Microarray_results | GPL14372_Probes_27433 | |||||
GPL14372_Probes_82380 | ||||||
GPL14372_Probes_82381 | ||||||
GPL14372_Probes_82382 | ||||||
RNASeq_FPKM | WBls:0000032 | 19.5461 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-4.3 | Curator_confirmed | WBPerson4055 | |||
Method | curated |