WormBase Tree Display for CDS: PPA10281
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PPA10281 | SMap | S_parent | Sequence | PPA_ChrIII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S341-6.31 | ||
DB_remark | contains similarity to Pfam domain PF02301 (HORMA domain); contains similarity to Interpro domains IPR003511 (HORMA domain), IPR036570 (HORMA domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00099835 | ||||
Corresponding_transcript | PPA10281.1 | |||||
Corresponding_protein | PP52074 | |||||
Corresponding_oligo_set | GPL14372_Probes_66262 | |||||
GPL14372_Probes_66265 | ||||||
GPL14372_Probes_66266 | ||||||
Microarray_results | GPL14372_Probes_66262 | |||||
GPL14372_Probes_66265 | ||||||
GPL14372_Probes_66266 | ||||||
RNASeq_FPKM | WBls:0000032 | 13.3955 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 83.064 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S341-6.31 | Curator_confirmed | WBPerson4055 | |||
Method | curated |