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WormBase Tree Display for CDS: PPA10354

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Name Class

PPA10354SMapS_parentSequencePPA_ChrI
StructureSource_exons (40)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-0.65
DB_remarkcontains similarity to Pfam domains PF00929 (Exonuclease), PF02460 (Patched family); contains similarity to Interpro domains IPR003392 (Protein patched/dispatched), IPR012337 (Ribonuclease H-like superfamily), IPR036397 (Ribonuclease H superfamily), IPR013520 (Exonuclease, RNase T/DNA polymerase III)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00099908
Corresponding_transcriptPPA10354.1
Corresponding_proteinPP70332
Corresponding_oligo_setGPL14372_Probes_48861
GPL14372_Probes_48862
GPL14372_Probes_48863
GPL14372_Probes_48864
GPL14372_Probes_48865
GPL14372_Probes_48866
GPL14372_Probes_48867
GPL14372_Probes_48868
Matching_cDNAFE932990Inferred_automaticallytranscript_builder.pl
FE931968Inferred_automaticallytranscript_builder.pl
FG097756Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_48861
GPL14372_Probes_48862
GPL14372_Probes_48863
GPL14372_Probes_48864
GPL14372_Probes_48865
GPL14372_Probes_48866
GPL14372_Probes_48867
GPL14372_Probes_48868
RNASeq_FPKMWBls:00000327.70924From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010126.4016From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S71-0.65Curator_confirmedWBPerson4055
Methodcurated