WormBase Tree Display for CDS: PPA10360
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PPA10360 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-1.25 | ||
DB_remark | PPA-NATB-1 protein; contains similarity to Pfam domain PF00583 (Acetyltransferase (GNAT) family); contains similarity to Interpro domains IPR000182 (GNAT domain), IPR016181 (Acyl-CoA N-acyltransferase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00099914 | ||||
Corresponding_transcript | PPA10360.1 | |||||
Corresponding_protein | PP60154 | |||||
Corresponding_oligo_set | GPL14372_Probes_48890 | |||||
Matching_cDNA | FG103350 | Inferred_automatically | transcript_builder.pl | |||
EB183150 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_48890 | |||||
RNASeq_FPKM | WBls:0000032 | 11.8803 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 14.0317 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-1.25 | Curator_confirmed | WBPerson4055 | |||
Method | curated |