Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA10464

expand all nodes | collapse all nodes | view schema

Name Class

PPA10464SMapS_parentSequencePPA_ChrI
StructureSource_exons (67)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-24.126
DB_remarkPPA-AMX-1 protein; contains similarity to Pfam domains PF01593 (Flavin containing amine oxidoreductase), PF04099 (Sybindin-like family), PF04433 (SWIRM domain); contains similarity to Interpro domains IPR036188 (FAD/NAD(P)-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR011012 (Longin-like domain superfamily), IPR007233 (Trafficking protein particle complex subunit), IPR002937 (Amine oxidase), IPR009057 (Homeobox-like domain superfamily), IPR007526 (SWIRM domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00100018
Corresponding_transcriptPPA10464.1
Corresponding_proteinPP59604
Corresponding_oligo_setGPL14372_Probes_20348
GPL14372_Probes_20349
GPL14372_Probes_20350
GPL14372_Probes_20351
GPL14372_Probes_20352
GPL14372_Probes_72203
GPL14372_Probes_72204
GPL14372_Probes_72205
GPL14372_Probes_72207
Microarray_resultsGPL14372_Probes_20348
GPL14372_Probes_20349
GPL14372_Probes_20350
GPL14372_Probes_20351
GPL14372_Probes_20352
GPL14372_Probes_72203
GPL14372_Probes_72204
GPL14372_Probes_72205
GPL14372_Probes_72207
RNASeq_FPKMWBls:000003211.096From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.58616From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S207-24.126Curator_confirmedWBPerson4055
Methodcurated