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WormBase Tree Display for CDS: PPA10920

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Name Class

PPA10920SMapS_parentSequencePPA_ChrIV
StructureSource_exons (29)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2838-47.122
TREEFAMTREEFAM_IDTF352036
DB_remarkcontains similarity to Pfam domains PF00067 (Cytochrome P450), PF07690 (Major Facilitator Superfamily); contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR011701 (Major facilitator superfamily), IPR036259 (MFS transporter superfamily), IPR036396 (Cytochrome P450 superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00100474
Corresponding_transcriptPPA10920.1
Corresponding_proteinPP72789
Corresponding_oligo_setGPL14372_Probes_19912
GPL14372_Probes_19913
GPL14372_Probes_19915
GPL14372_Probes_19916
Microarray_resultsGPL14372_Probes_19912
GPL14372_Probes_19913
GPL14372_Probes_19915
GPL14372_Probes_19916
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2838-47.122Curator_confirmedWBPerson4055
Methodcurated