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WormBase Tree Display for CDS: PPA11518

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Name Class

PPA11518SMapS_parentSequencePPA_ChrIV
StructureSource_exons114
896973
11381195
14341478
17911855
24962553
28802972
36513731
40704159
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2854-24.5
TREEFAMTREEFAM_IDTF315098
DB_remarkcontains similarity to Pfam domain PF08617 (Kinase binding protein CGI-121); contains similarity to Interpro domains IPR013926 (CGI121/TPRKB), IPR036504 (CGI121/TPRKB superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00101072
Corresponding_transcriptPPA11518.1
Corresponding_proteinPP31813
Corresponding_oligo_setGPL14372_Probes_4560
GPL14372_Probes_4561
GPL14372_Probes_4562
GPL14372_Probes_4563
Microarray_resultsGPL14372_Probes_4560
GPL14372_Probes_4561
GPL14372_Probes_4562
GPL14372_Probes_4563
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2854-24.5Curator_confirmedWBPerson4055
Methodcurated