WormBase Tree Display for CDS: PPA11593
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PPA11593 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons (17) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S336-1.27 | ||
TREEFAM | TREEFAM_ID | TF313272 | ||||
DB_remark | contains similarity to Pfam domain PF00860 (Permease family); contains similarity to Interpro domain IPR006043 (Nucleobase cation symporter 2 family) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00101147 | ||||
Corresponding_transcript | PPA11593.1 | |||||
Corresponding_protein | PP73700 | |||||
Corresponding_oligo_set | GPL14372_Probes_73934 | |||||
GPL14372_Probes_73936 | ||||||
Microarray_results | GPL14372_Probes_73934 | |||||
GPL14372_Probes_73936 | ||||||
RNASeq_FPKM | WBls:0000032 | 6.59837 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 10.3905 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S336-1.27 | Curator_confirmed | WBPerson4055 | |||
Method | curated |