WormBase Tree Display for CDS: PPA11785
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PPA11785 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 150 | |||
197 | 297 | |||||
592 | 703 | |||||
751 | 824 | |||||
868 | 940 | |||||
1074 | 1133 | |||||
1285 | 1350 | |||||
1391 | 1506 | |||||
1655 | 1766 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-20.33 | ||
DB_remark | contains similarity to Pfam domain PF02118 (Srg family chemoreceptor); contains similarity to Interpro domains IPR000609 (7TM GPCR, serpentine receptor class g (Srg)), IPR040298 () | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00101339 | ||||
Corresponding_transcript | PPA11785.1 | |||||
Corresponding_protein | PP55015 | |||||
Corresponding_oligo_set | GPL14372_Probes_18532 | |||||
GPL14372_Probes_18533 | ||||||
GPL14372_Probes_18534 | ||||||
Microarray_results | GPL14372_Probes_18532 | |||||
GPL14372_Probes_18533 | ||||||
GPL14372_Probes_18534 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-20.33 | Curator_confirmed | WBPerson4055 | |||
Method | curated |