WormBase Tree Display for CDS: PPA11803
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PPA11803 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (42) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-20.82 | ||
DB_remark | PPA-ASAH-2.2 protein; contains similarity to Pfam domains PF02275 (Linear amide C-N hydrolases, choloylglycine hydrolase family), PF15508 (beta subunit of N-acylethanolamine-hydrolyzing acid amidase); contains similarity to Interpro domains IPR029132 (Choloylglycine hydrolase/NAAA C-terminal), IPR029130 (Acid ceramidase, N-terminal) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00101357 | ||||
Corresponding_transcript | PPA11803.1 | |||||
Corresponding_protein | PP69882 | |||||
Corresponding_oligo_set | GPL14372_Probes_18557 | |||||
GPL14372_Probes_18559 | ||||||
GPL14372_Probes_69522 | ||||||
GPL14372_Probes_69523 | ||||||
GPL14372_Probes_69525 | ||||||
GPL14372_Probes_69526 | ||||||
Microarray_results | GPL14372_Probes_18557 | |||||
GPL14372_Probes_18559 | ||||||
GPL14372_Probes_69522 | ||||||
GPL14372_Probes_69523 | ||||||
GPL14372_Probes_69525 | ||||||
GPL14372_Probes_69526 | ||||||
RNASeq_FPKM | WBls:0000032 | 0.96168 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 27.2564 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-20.82 | Curator_confirmed | WBPerson4055 | |||
Method | curated |