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WormBase Tree Display for CDS: PPA11905

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Name Class

PPA11905SMapS_parentSequencePPA_ChrII
StructureSource_exons (22)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S41-13.16
TREEFAMTREEFAM_IDTF314942
DB_remarkcontains similarity to Pfam domain PF00657 (GDSL-like Lipase/Acylhydrolase); contains similarity to Interpro domains IPR001087 (GDSL lipase/esterase), IPR036514 (SGNH hydrolase superfamily), IPR038885 (Phospholipase B1, membrane-associated)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00101459
Corresponding_transcriptPPA11905.1
Corresponding_proteinPP69260
Corresponding_oligo_setGPL14372_Probes_85942
GPL14372_Probes_85943
Microarray_resultsGPL14372_Probes_85942
GPL14372_Probes_85943
RNASeq_FPKMWBls:00000322.4276From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S41-13.16Curator_confirmedWBPerson4055
Methodcurated