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WormBase Tree Display for CDS: PPA12317

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Name Class

PPA12317SMapS_parentSequencePPA_ChrI
StructureSource_exons (33)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-7.0
DB_remarkPPA-NRF-5 protein; contains similarity to Pfam domain PF02886 (LBP / BPI / CETP family, C-terminal domain); contains similarity to Interpro domains IPR001124 (Lipid-binding serum glycoprotein, C-terminal), IPR032942 (BPI/LBP/Plunc family), IPR017943 (Bactericidal permeability-increasing protein, alpha/beta domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00101871
Corresponding_transcriptPPA12317.1
Corresponding_proteinPP69416
Corresponding_oligo_set (11)
Microarray_results (11)
RNASeq_FPKMWBls:00000327.48756From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001018.84238From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S71-7.0Curator_confirmedWBPerson4055
Methodcurated