WormBase Tree Display for CDS: PPA12317
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PPA12317 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (33) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-7.0 | ||
DB_remark | PPA-NRF-5 protein; contains similarity to Pfam domain PF02886 (LBP / BPI / CETP family, C-terminal domain); contains similarity to Interpro domains IPR001124 (Lipid-binding serum glycoprotein, C-terminal), IPR032942 (BPI/LBP/Plunc family), IPR017943 (Bactericidal permeability-increasing protein, alpha/beta domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00101871 | ||||
Corresponding_transcript | PPA12317.1 | |||||
Corresponding_protein | PP69416 | |||||
Corresponding_oligo_set (11) | ||||||
Microarray_results (11) | ||||||
RNASeq_FPKM | WBls:0000032 | 7.48756 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 8.84238 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-7.0 | Curator_confirmed | WBPerson4055 | |||
Method | curated |